Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919673.1_cds_XP_016468867.1_61463
CDS Infomation

[gene=LOC107791340] [db_xref=GeneID:107791340] [protein=SPX and EXS domain-containing protein 1-like] [protein_id=XP_016468867.1] [location=complement(join(37392..37649,37948..38017,39346..39511,40192..40342,41272..41319,42640..42693,43358..43471,43984..44079,44970..45086,45173..45265,45354..45392,48462..48595,48700..48781))] [gbkey=CDS]
Sequence

ATGTTTGGGAGTCTTGTGGATGCTCCTGCCAACAGTCCACATCTACGGAGGTCTGGAAGC
CGAGCAGTTGTATCTGATCTTGGTGTTATTGAGCTTGGAGGGAGTCCTGAAGAATCCCTT
TTGCATAGCATAGAAGTCGATGAAATGAAGGGTGTGACGACACCATTGAGCAGCGCGGCC
ATAATGCCATCTCCTGTTCTCTTATGGAGATTTAAGGTACTTCTGTTCCTCATTTGGGGT
GTCAGTTGTTGCAAGATTGGCTGGGATTCAGTCATGAGAATGAGTGTAAACCTTCGTGAT
CTATTCTTATATGAGGCTTTTCTTTATTACAATCCTCTTCTTCTTGTGACCATGATGGTT
TGGTTTTGGGGCATAAACCTATGGGTTTTCGCGCAGGCTAATGTCAACTATGCTAAAATT
TTTGATCTTGATCAGAATCATCTCTCTCACAGAGAGATTTGGAAGTGTGCTACTTGGATG
ACGATCATTGTGCCGACAAGCATGACGGCCTATCTCTATCTCTATTCACATGGAGAAGTT
TCATTGGCTGCATCTCAACCAGTGCTTCTATACGCTGGGTTTGCCATGACTCTGATATTT
CCATTTGACATATTCTTTTTGTCATCTCGCTACTTTTTGTTAAGGACTCTTTGGCGGATA
GTTTTCCCGTTACAGGCTATATCATTTGCTGACTTCTTTCTGGCTGATATATTGACTTCT
ATGTCAAAGGTATTTTCGGATCTGGAACGTTCGGTCTGTAGAATGGTTCATCGACAGGTT
GCTACCATTGCATGGTTTGAAGCTGATTCTGTTTGTGGAAGTCATGCTGTTGCAATTCCC
ATTGTTCTTGTATTGCCTTATCTATTCCGTCTCTTTCAGTGTCTTCGGCAATATAAGGAT
ACTAGAGAGAAGACTACCCTGTTGAATGCGTTAAAATATTCAACTGCAGTACCTGTGATA
TTTTTCTCAGCCCTTAAGTATCACGTCTTCCCTGACAACTGGGTTAATATTTATCGTCCT
TTATGGCTTCTGTCGGGTGTGGTGAACTTTCTCTACTCATTCTATTGGGATCTGACAAGA
GATTGGGACTTGAGTTGCTTCACTCGGATTTTCAAGTTCAGCAGACCGAATGCATTATCA
CACTTGTTATATGGGCGGAAATGGGTCTACTTTTGGGTAATTGGAAGCAACCTCATCCTG
CGATGCACGTGGACATACAAGCTGTCTGCCCATCTCCGGCACAATTATCTCACTGTGTTC
GCAATAACTGCGCTTGAGATCTTCCGTCGCTTCCAGTGGGCGTTCTTCCGTGTAGAGAAC
GAGTGGAATAAAACGAACTCTAAACCAAATATTCAACTCTCCACGAGTGACAAGCCAACT
GATGAACAAAAATTACTAGACCCAAACGGTCACAGTGTATAG

Peptide Sequence

PEP ID

XP_016468867.1
PEP Infomation

PREDICTED: SPX and EXS domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MFGSLVDAPANSPHLRRSGSRAVVSDLGVIELGGSPEESLLHSIEVDEMKGVTTPLSSAA
IMPSPVLLWRFKVLLFLIWGVSCCKIGWDSVMRMSVNLRDLFLYEAFLYYNPLLLVTMMV
WFWGINLWVFAQANVNYAKIFDLDQNHLSHREIWKCATWMTIIVPTSMTAYLYLYSHGEV
SLAASQPVLLYAGFAMTLIFPFDIFFLSSRYFLLRTLWRIVFPLQAISFADFFLADILTS
MSKVFSDLERSVCRMVHRQVATIAWFEADSVCGSHAVAIPIVLVLPYLFRLFQCLRQYKD
TREKTTLLNALKYSTAVPVIFFSALKYHVFPDNWVNIYRPLWLLSGVVNFLYSFYWDLTR
DWDLSCFTRIFKFSRPNALSHLLYGRKWVYFWVIGSNLILRCTWTYKLSAHLRHNYLTVF
AITALEIFRRFQWAFFRVENEWNKTNSKPNIQLSTSDKPTDEQKLLDPNGHSV

Transcript Sequence

Gene sequence data has not been registered.